Latest Accepted Articles
Display Method:
, Available online
Abstract:
This study aims at identifying the microevolutionary processes responsible for the onset of the remarkable phylogeographic structure already recorded for the endangered giant clam Tridacna squamosa across its distribution range. For this purpose, the evolutionary, biogeographic and demographic histories of the species were comprehensively reconstructed in a mitochondrial dataset comprising nearly the whole available published cytochrome c oxidase 1 gene sequences of T. squamosa. Relatively higher level of genetic diversification was unveiled within T. squamosa, in comparison to earlier macro-geographic investigations, whereby five mitochondrial clusters were delineated. The resulting divergent gene pools in the Red Sea, Western Indian Ocean, Indo-Malay Archipelago and Western Pacific were found to be driven by Early Pleistocene glacial vicariance events among refugial lineages. Accentuated genetic diversification of the species across the Indo-Malay Archipelago was successively triggered by historical dispersal event during the Mid-Pleistocene MIS19c interglacial. This latter historical event might have also enabled genetically distinct giant clams from the Indo-Malay Archipelago to subsequently colonize the Western Pacific, accounting for the genetic diversity hotspot detected within this region (comprising three divergent mitochondrial clusters). Late Pleistocene demographic expansion of T. squamosa, during the Last Interglacial period, could have contributed to forging spatial distribution of the so far delineated genetic entities across the Indo-Western Pacific. Overall, being resilient to major climate shifts during the Pleistocene through adaptation and consequent diversification, T. squamosa could be used as a model species to track the impact of climate change on genetic variability and structure of marine species. In particular, the new information, provided in this investigation, may help with understanding and/or predicting the consequences of ongoing global warming on genetic polymorphism of endangered coral reef species among which Tridacna sp. are listed as ecologically important.
This study aims at identifying the microevolutionary processes responsible for the onset of the remarkable phylogeographic structure already recorded for the endangered giant clam Tridacna squamosa across its distribution range. For this purpose, the evolutionary, biogeographic and demographic histories of the species were comprehensively reconstructed in a mitochondrial dataset comprising nearly the whole available published cytochrome c oxidase 1 gene sequences of T. squamosa. Relatively higher level of genetic diversification was unveiled within T. squamosa, in comparison to earlier macro-geographic investigations, whereby five mitochondrial clusters were delineated. The resulting divergent gene pools in the Red Sea, Western Indian Ocean, Indo-Malay Archipelago and Western Pacific were found to be driven by Early Pleistocene glacial vicariance events among refugial lineages. Accentuated genetic diversification of the species across the Indo-Malay Archipelago was successively triggered by historical dispersal event during the Mid-Pleistocene MIS19c interglacial. This latter historical event might have also enabled genetically distinct giant clams from the Indo-Malay Archipelago to subsequently colonize the Western Pacific, accounting for the genetic diversity hotspot detected within this region (comprising three divergent mitochondrial clusters). Late Pleistocene demographic expansion of T. squamosa, during the Last Interglacial period, could have contributed to forging spatial distribution of the so far delineated genetic entities across the Indo-Western Pacific. Overall, being resilient to major climate shifts during the Pleistocene through adaptation and consequent diversification, T. squamosa could be used as a model species to track the impact of climate change on genetic variability and structure of marine species. In particular, the new information, provided in this investigation, may help with understanding and/or predicting the consequences of ongoing global warming on genetic polymorphism of endangered coral reef species among which Tridacna sp. are listed as ecologically important.
, Available online
Abstract:
Owing to the significant differences in environmental characteristics and explanatory factors among estuarine and coastal regions, research on diatom transfer functions and database establishment remains incomplete. This study analysed diatoms in surface sediment samples and a sediment core from the Lianjiang coast of the East China Sea, together with environmental variables. Principal component analysis of the environmental variables showed that sea surface salinity (SSS) and sea surface temperature were the most important factors controlling hydrological conditions in the Lianjiang coastal area, whereas canonical correspondence analysis indicated that SSS and pH were the main environmental factors affecting diatom distribution. Based on the modern diatom species–environmental variable database, we developed a diatom-based SSS transfer function to quantitatively reconstruct the variability in SSS between 1984 and 2021 for sediment core HK3 from the Lianjiang coastal area. The agreement between the reconstructed SSS and instrument SSS data from 1984–2021 suggests that diatom-based SSS reconstruction is reliable for studying past SSS variability in the Lianjiang coastal area. Three low SSS events in AD 2019, 2013, and 1999, together with an increased relative concentration of freshwater diatom species and coarser sediment grain sizes, corresponded to two super-typhoon events and a catastrophic flooding event in Lianjiang County. Thus, a diatom-based SSS transfer function for reconstructing past SSS variability in the estuarine and coastal areas of the East China Sea can be further used to reflect the paleoenvironmental events in this region.
Owing to the significant differences in environmental characteristics and explanatory factors among estuarine and coastal regions, research on diatom transfer functions and database establishment remains incomplete. This study analysed diatoms in surface sediment samples and a sediment core from the Lianjiang coast of the East China Sea, together with environmental variables. Principal component analysis of the environmental variables showed that sea surface salinity (SSS) and sea surface temperature were the most important factors controlling hydrological conditions in the Lianjiang coastal area, whereas canonical correspondence analysis indicated that SSS and pH were the main environmental factors affecting diatom distribution. Based on the modern diatom species–environmental variable database, we developed a diatom-based SSS transfer function to quantitatively reconstruct the variability in SSS between 1984 and 2021 for sediment core HK3 from the Lianjiang coastal area. The agreement between the reconstructed SSS and instrument SSS data from 1984–2021 suggests that diatom-based SSS reconstruction is reliable for studying past SSS variability in the Lianjiang coastal area. Three low SSS events in AD 2019, 2013, and 1999, together with an increased relative concentration of freshwater diatom species and coarser sediment grain sizes, corresponded to two super-typhoon events and a catastrophic flooding event in Lianjiang County. Thus, a diatom-based SSS transfer function for reconstructing past SSS variability in the estuarine and coastal areas of the East China Sea can be further used to reflect the paleoenvironmental events in this region.
, Available online
Abstract:
The conventional theory of concerted evolution has been used to explain the lack of sequence variation in ribosomal RNA (rRNA) genes across diverse eukaryotic species. However, recent investigations into rRNA genes in flatfish genome have resulted in controversial findings. This study focuses on 18S rRNA genes of the widely distributed tongue sole, Cynoglossus abbreviatus (Pleuronectiformes: Cynoglossidae), aiming to explore sequence polymorphism. Five distinct 18S rDNA sequence types (Type A, B, R1, R2, and R3) were identified, suggesting a departure from concerted evolution. A combination of general criteria and variations in highly conserved regions were employed to detect pseudogenes. The results pinpointed Type A sequences as potential pseudogenes due to significant sequence variations and deviations in secondary structure within highly conserved regions. Three types (Type R1, R2, and R3) were identified as recombinants between Type A and B sequences, with simple crossing over and gene conversion as the most likely recombination mechanisms. These findings not only contribute to rRNA pseudogene identification but also shed light on the evolutionary dynamics of rRNA genes in teleost genomes.
The conventional theory of concerted evolution has been used to explain the lack of sequence variation in ribosomal RNA (rRNA) genes across diverse eukaryotic species. However, recent investigations into rRNA genes in flatfish genome have resulted in controversial findings. This study focuses on 18S rRNA genes of the widely distributed tongue sole, Cynoglossus abbreviatus (Pleuronectiformes: Cynoglossidae), aiming to explore sequence polymorphism. Five distinct 18S rDNA sequence types (Type A, B, R1, R2, and R3) were identified, suggesting a departure from concerted evolution. A combination of general criteria and variations in highly conserved regions were employed to detect pseudogenes. The results pinpointed Type A sequences as potential pseudogenes due to significant sequence variations and deviations in secondary structure within highly conserved regions. Three types (Type R1, R2, and R3) were identified as recombinants between Type A and B sequences, with simple crossing over and gene conversion as the most likely recombination mechanisms. These findings not only contribute to rRNA pseudogene identification but also shed light on the evolutionary dynamics of rRNA genes in teleost genomes.
, Available online
Abstract:
To protect the sustainability of the benefits from seas and near coastal areas, which have under the effect of the very complex hydrodynamic conditions and intensive human activities, without disrupting the balance of nature, it is necessary to image the status of the seafloor features. Therefore, this study presents the deformations, depositional conditions, underwater constructions, and the other non-natural impacts on the seafloor of the nearshore area at western Istanbul (between Küçükçekmece and Büyükçekmece Lagoons) where it intensely used by the citizens. The results of the study may provide some guidance for understanding the impacts and risk factors of uses that are or will be conducted in coastal and/or near-coastal areas. Construction planning for civil coastal structures and areas should be done in great harmony with nature, minimizing negative environmental impacts. Although sediment distribution in the area is generally quite complex, the current state of the region, wave action, hydrodynamic conditions, the amount of material transported from the land, and bathymetry are important influencing factors. The seafloor has been damaged primarily by anchor deformation and associated bottom scanning, as well as disturbing trawl tracks. The seafloor was observed as partially shallowing near the constructions (such as natural gas pipelines, fishermen's shelter, and port piles) of coastal areas and associated with sand deposits. Therefore, scanning the seafloor using side-scan sonar may provide valuable frequency data to prevent future disruptions.
To protect the sustainability of the benefits from seas and near coastal areas, which have under the effect of the very complex hydrodynamic conditions and intensive human activities, without disrupting the balance of nature, it is necessary to image the status of the seafloor features. Therefore, this study presents the deformations, depositional conditions, underwater constructions, and the other non-natural impacts on the seafloor of the nearshore area at western Istanbul (between Küçükçekmece and Büyükçekmece Lagoons) where it intensely used by the citizens. The results of the study may provide some guidance for understanding the impacts and risk factors of uses that are or will be conducted in coastal and/or near-coastal areas. Construction planning for civil coastal structures and areas should be done in great harmony with nature, minimizing negative environmental impacts. Although sediment distribution in the area is generally quite complex, the current state of the region, wave action, hydrodynamic conditions, the amount of material transported from the land, and bathymetry are important influencing factors. The seafloor has been damaged primarily by anchor deformation and associated bottom scanning, as well as disturbing trawl tracks. The seafloor was observed as partially shallowing near the constructions (such as natural gas pipelines, fishermen's shelter, and port piles) of coastal areas and associated with sand deposits. Therefore, scanning the seafloor using side-scan sonar may provide valuable frequency data to prevent future disruptions.
, Available online , doi: 10.1007/s13131-023-2217-3
Abstract:
Isopod crustaceans of the family Dajidae are exclusively marine ectoparasites. The genus NotophryxusG. O. Sars, 1883 currently includes nine nominal species, which are very rarely reported as the chances for encountering these specimens are unpredictable. Our comprehension of the taxonomy, biology, ecology, and life cycle of species belonging to the Notophryxus genus is notably lacking. All nominal species of Notophryxus genus are reviewed here to obtain a comprehensive and integrative taxonomic understanding of this genus, in an attempt to address the lacunae. This paper also documents the rediscovery of an ectoparasitic isopod from the genus Notophryxus in Indian waters, after 55 years. Adult isopod specimens obtained from the outer reefs of Amini Island in the Lakshadweep archipelago, Southeastern Arabian Sea, display morphological congruence to Notophryxus globularis G.O. Sars, 1885 . The only previous report on this species dates back to 1885 from G.O. Sars' description of N. globularis as an ectoparasite on the euphausiid Thysanoessa gregaria G.O. Sars, 1883 in the North Pacific. This discovery represents a range extension of N. globularis from the North Pacific to the Arabian Sea. Two cryptoniscid larvae and three adult females of N. globularis (with dwarf males) were found attached to four adult mysid specimens of Siriella aequiremis Hansen, 1910 . The present study provides an improved diagnosis of N. globularis with the aid of light microscopy images and line drawings which was not given in the original G O Sars, 1885 report. This research also provides a concise description of cryptoniscid larvae from the same sampling location and same host which is most likely to be N. globularis larvae.
Isopod crustaceans of the family Dajidae are exclusively marine ectoparasites. The genus Notophryxus
, Available online , doi: 10.1007/s13131-023-2254-y
Abstract:
Ocean productivity is the foundation of the marine food web, which continuously removes atmospheric carbon dioxide and supports life at sea and on land. Spatio-temporal variability of net primary productivity (NPP), sea surface temperature (SST), sea surface salinity (SSS), mixed layer depth (MLD), and euphotic zone depth (EZD) in the northern Bay of Bengal (BoB) during the three monsoon seasons were examined in this study based on remote sensing data for the period 2005 to 2020. To compare the NPP distribution between the coastal zones and open BoB, the study area was divided into five zones (Z1-Z5). The results suggest that the most productive Z2 and Z1 are located at the head bay area and are directly influenced by freshwater discharge together with riverine sediment and nutrient loads. Across Z1-Z5, the NPP ranges from 5315.38 mg/(m2·d) to 346.7 mg/(m2·d) (in terms of carbon, since then the same). The highest monthly average NPP of 5315.38 mg/(m2·d) in February and 5039.36 mg/(m2·d) in June were observed from Z2, while the lowest monthly average of 346.72 mg/(m2·d) was observed in March from Z4, which is an oceanic zone. EZD values vary from 6-154 m for the study area, and it has an inverse correlation with NPP concentration. EZD is deeper during the summer season and shallower during the wintertime, with a corresponding increase in productivity. Throughout the year, monthly SST shows slight fluctuation for the entire study area, and statistical analysis showed a significant correlation among NPP, and EZD, overall positive between NPP and MLD, whereas no significant correlation among SSS, and SST for the northern Bay of Bengal. Long-term trends in SST and productivity were significantly positive in head bay zones but negatively productive in the open ocean. The findings in this study on the distribution of NPP, SST, SSS, MLD, and EZD and their seasonal variability in five different zones of BoB can be used to further improve the management of marine resources and overall environmental conditional in response to climate changes in the BoB as they are of utmost relevance to the fisheries for the three bordering countries.
Ocean productivity is the foundation of the marine food web, which continuously removes atmospheric carbon dioxide and supports life at sea and on land. Spatio-temporal variability of net primary productivity (NPP), sea surface temperature (SST), sea surface salinity (SSS), mixed layer depth (MLD), and euphotic zone depth (EZD) in the northern Bay of Bengal (BoB) during the three monsoon seasons were examined in this study based on remote sensing data for the period 2005 to 2020. To compare the NPP distribution between the coastal zones and open BoB, the study area was divided into five zones (Z1-Z5). The results suggest that the most productive Z2 and Z1 are located at the head bay area and are directly influenced by freshwater discharge together with riverine sediment and nutrient loads. Across Z1-Z5, the NPP ranges from 5315.38 mg/(m2·d) to 346.7 mg/(m2·d) (in terms of carbon, since then the same). The highest monthly average NPP of 5315.38 mg/(m2·d) in February and 5039.36 mg/(m2·d) in June were observed from Z2, while the lowest monthly average of 346.72 mg/(m2·d) was observed in March from Z4, which is an oceanic zone. EZD values vary from 6-154 m for the study area, and it has an inverse correlation with NPP concentration. EZD is deeper during the summer season and shallower during the wintertime, with a corresponding increase in productivity. Throughout the year, monthly SST shows slight fluctuation for the entire study area, and statistical analysis showed a significant correlation among NPP, and EZD, overall positive between NPP and MLD, whereas no significant correlation among SSS, and SST for the northern Bay of Bengal. Long-term trends in SST and productivity were significantly positive in head bay zones but negatively productive in the open ocean. The findings in this study on the distribution of NPP, SST, SSS, MLD, and EZD and their seasonal variability in five different zones of BoB can be used to further improve the management of marine resources and overall environmental conditional in response to climate changes in the BoB as they are of utmost relevance to the fisheries for the three bordering countries.
, Available online , doi: 10.1007/s13131-023-2244-0
Abstract:
Hypoxia off the Changjiang River Estuary has been the subject of much attention, yet systematic observations have been lacking, resulting in a lack of knowledge regarding its long-term change and drivers. By revisiting the repeated surveys of dissolved oxygen (DO) and other relevant hydrographic parameters along the section from the Changjiang River Estuary to the Cheju Island in the summer from 1997 to 2014, rather different trends were revealed for the dual low-DO cores. The nearshore low-DO core, located close to the river mouth and relatively stable, shows that hypoxia has become more severe with the lowest DO descending at a rate of −0.07 mg/(L·a) and the thickness of low-DO zone rising at a rate of 0.43 m/a. The offshore core, centered around 40-m isobath but moving back and forth between 123.5°–125°E, shows large fluctuations in the minimum DO concentration, with the thickness of low-DO zone falling at a rate of −1.55 m/a. The probable factors affecting the minimum DO concentration in the two regions also vary. In the nearshore region, the decreasing minimum DO is driven by the increase in both stratification and primary productivity, with the enhanced extension of the Changjiang River Diluted Water (CDW) strengthening stratification. In the offshore region, the fluctuating trend of the minimum DO concentration indicates that both DO loss and DO supplement are distinct. The DO loss is primarily attributed to bottom apparent oxygen utilization caused by the organic matter decay and is also relevant to the advection of low-DO water from the nearshore region. The DO supplement is primarily due to weakened stratification. Our analysis also shows that the minimum DO concentration in the nearshore region was extremely low in 1998, 2003, 2007 and 2010, related to El Niño signal in these summers.
Hypoxia off the Changjiang River Estuary has been the subject of much attention, yet systematic observations have been lacking, resulting in a lack of knowledge regarding its long-term change and drivers. By revisiting the repeated surveys of dissolved oxygen (DO) and other relevant hydrographic parameters along the section from the Changjiang River Estuary to the Cheju Island in the summer from 1997 to 2014, rather different trends were revealed for the dual low-DO cores. The nearshore low-DO core, located close to the river mouth and relatively stable, shows that hypoxia has become more severe with the lowest DO descending at a rate of −0.07 mg/(L·a) and the thickness of low-DO zone rising at a rate of 0.43 m/a. The offshore core, centered around 40-m isobath but moving back and forth between 123.5°–125°E, shows large fluctuations in the minimum DO concentration, with the thickness of low-DO zone falling at a rate of −1.55 m/a. The probable factors affecting the minimum DO concentration in the two regions also vary. In the nearshore region, the decreasing minimum DO is driven by the increase in both stratification and primary productivity, with the enhanced extension of the Changjiang River Diluted Water (CDW) strengthening stratification. In the offshore region, the fluctuating trend of the minimum DO concentration indicates that both DO loss and DO supplement are distinct. The DO loss is primarily attributed to bottom apparent oxygen utilization caused by the organic matter decay and is also relevant to the advection of low-DO water from the nearshore region. The DO supplement is primarily due to weakened stratification. Our analysis also shows that the minimum DO concentration in the nearshore region was extremely low in 1998, 2003, 2007 and 2010, related to El Niño signal in these summers.
, Available online , doi: 10.1007/s13131-023-2253-z
Abstract:
Significant advancements have been made in the study of Mesozoic granite buried hills in the Songnan Low Uplift (SNLU) of the Qiongdongnan Basin. These findings indicate that the bedrock buried hills in this basin hold great potential for exploration. Borehole samples taken from the granite buried hills in the SNLU were analyzed using apatite fission track (AFT) and zircon (U-Th)/He data to unravel the thermal history of the basement rock. This information is crucial for understanding the processes of exhumation and alteration that occurred after its formation. Thermal modeling of a sample from the western bulge of the SNLU revealed a prolonged cooling event from the late Mesozoic to the Oligocene period (~80−23.8 Ma), followed by a heating stage from the Miocene epoch until the present (~23.8 Ma to present). In contrast, the sample from the eastern bulge experienced a more complex thermal history. It underwent two cooling stages during the late Mesozoic to late Eocene period (~80−36.4 Ma) and the late Oligocene period (~30−23.8 Ma), interspersed with two heating phases during the late Eocene to early Oligocene period (~36.4−30 Ma) and the Miocene epoch to recent times (~23.8−0 Ma), respectively. The differences in exhumation histories between the western and eastern bulges during the late Eocene to Oligocene period in the SNLU can likely be attributed to differences in fault activity. Unlike typical passive continental margin basins, the SNLU has experienced accelerated subsidence after the rifting phase, which began around 5.2 Ma ago. The possible mechanism for this abnormal post-rifting subsidence may be the decay or movement of the deep thermal source and the rapid cooling of the asthenosphere. Long-term and multi-episodic cooling and exhumation processes play a key role in the alteration of bedrock and contribute to the formation of reservoirs. On the other hand, rapid post-rifting subsidence (sedimentation) promotes the formation of cap rocks.
, Available online , doi: 10.1007/s13131-023-2295-x
Abstract:
The Agulhas system is the strongest western boundary current system in the Southern Hemisphere and plays an important role in modulating the Indian-to-Atlantic Ocean water exchange by the Agulhas leakage. It is difficult to measure in situ transport of the Agulhas leakage as well as the Agulhas retroflection position due to their intermittent nature. In this study, an innovative kinematic algorithm is designed and applied to the gridded altimeter observational data, to ascertain the longitudinal position of Agulhas retroflection, the stability of Agulhas jet stream, as well as its strength. The results show that the east-west shift of retroflection is related neither to the strength of Agulhas current nor to its stability. Further analysis uncovers the connection between the westward extension of Agulhas jet stream and an anomalous cyclonic circulation at its northern side, which is likely attributed to the local wind stress curl anomaly. To confirm the effect of local wind forcing on the east-west shift of retroflection, numerical sensitivity experiments are conducted. The results show that the local wind stress can induce a similar longitudinal shift of the retroflection as altimetry observations. Further statistical and case study indicates that whether an Agulhas ring can continuously migrate westward to the Atlantic Ocean or re-merge into the main flow depends on the retroflection position. Therefore, the westward retroflection may contribute to a stronger Agulhas leakage than the eastward retroflection.
The Agulhas system is the strongest western boundary current system in the Southern Hemisphere and plays an important role in modulating the Indian-to-Atlantic Ocean water exchange by the Agulhas leakage. It is difficult to measure in situ transport of the Agulhas leakage as well as the Agulhas retroflection position due to their intermittent nature. In this study, an innovative kinematic algorithm is designed and applied to the gridded altimeter observational data, to ascertain the longitudinal position of Agulhas retroflection, the stability of Agulhas jet stream, as well as its strength. The results show that the east-west shift of retroflection is related neither to the strength of Agulhas current nor to its stability. Further analysis uncovers the connection between the westward extension of Agulhas jet stream and an anomalous cyclonic circulation at its northern side, which is likely attributed to the local wind stress curl anomaly. To confirm the effect of local wind forcing on the east-west shift of retroflection, numerical sensitivity experiments are conducted. The results show that the local wind stress can induce a similar longitudinal shift of the retroflection as altimetry observations. Further statistical and case study indicates that whether an Agulhas ring can continuously migrate westward to the Atlantic Ocean or re-merge into the main flow depends on the retroflection position. Therefore, the westward retroflection may contribute to a stronger Agulhas leakage than the eastward retroflection.
, Available online , doi: 10.1007/s13131-023-2209-3
Abstract:
The spaceborne platform has unprecedently provided the global eddy-permitting (typically ~0.25°) products of Sea Surface Salinity (SSS), however the existing SSS products can hardly resolve mesoscale motions due to the heavy noises therein and the over-smoothing in denoising processes. By means of the Multi-fractal Fusion (MFF), the high-resolution SSS product is synthesized with the template of Sea Surface Temperature (SST). Two low-resolution SSS products and four SST products are considered as the source data and the templates respectively to determine the best combination. The fused products are validated by the in situ observations and intercompared via SSS maps, Singularity Exponent maps and wavenumber spectra. The results demonstrate that the MFF can perform a good work in mitigating the noises and improving the resolution. The Climate Change Initiative (CCI) SSS + the REMote Sensing System (REMSS) SST can produce the 0.1° denoised product whose global mean STandard Derivation (STD) against Argo is 0.21 psu and the feature resolution can reach 30-40 km.
The spaceborne platform has unprecedently provided the global eddy-permitting (typically ~0.25°) products of Sea Surface Salinity (SSS), however the existing SSS products can hardly resolve mesoscale motions due to the heavy noises therein and the over-smoothing in denoising processes. By means of the Multi-fractal Fusion (MFF), the high-resolution SSS product is synthesized with the template of Sea Surface Temperature (SST). Two low-resolution SSS products and four SST products are considered as the source data and the templates respectively to determine the best combination. The fused products are validated by the in situ observations and intercompared via SSS maps, Singularity Exponent maps and wavenumber spectra. The results demonstrate that the MFF can perform a good work in mitigating the noises and improving the resolution. The Climate Change Initiative (CCI) SSS + the REMote Sensing System (REMSS) SST can produce the 0.1° denoised product whose global mean STandard Derivation (STD) against Argo is 0.21 psu and the feature resolution can reach 30-40 km.
, Available online , doi: 10.1007/s13131-023-2210-x
Abstract:
Retrieval of thin-ice thickness (TIT) using thermodynamic modeling is sensitive to the parameterization of the independent variables (coded in the model) and the uncertainty of the measured input variables. This article examines the deviation of the classical model’s TIT output when using different parameterization schemes and the sensitivity of the output to the ice thickness. Moreover, it estimates the uncertainty of the output in response to the uncertainties of the input variables. The parameterized independent variables include atmospheric longwave emissivity, air density, specific heat of air, latent heat of ice, conductivity of ice, snow depth, and snow conductivity. Measured input parameters include air temperature, ice surface temperature, and wind speed. Among the independent variables, the results show that the highest deviation is caused by adjusting the parameterization of snow conductivity and depth, followed ice conductivity. The sensitivity of the output TIT to ice thickness is highest when using parameterization of ice conductivity, atmospheric emissivity, and snow conductivity and depth. The retrieved TIT obtained using each parameterization scheme is validated using in situ measurements and satellite-retrieved data. From in situ measurements, the uncertainties of the measured air temperature and surface temperature are found to be high. The resulting uncertainties of TIT are evaluated using perturbations of the input data selected based on the probability distribution of the measurement error. The results show that the overall uncertainty of TIT to air temperature, surface temperature, and wind speed uncertainty is around 0.09 m, 0.049 m, and −0.005 m, respectively.
Retrieval of thin-ice thickness (TIT) using thermodynamic modeling is sensitive to the parameterization of the independent variables (coded in the model) and the uncertainty of the measured input variables. This article examines the deviation of the classical model’s TIT output when using different parameterization schemes and the sensitivity of the output to the ice thickness. Moreover, it estimates the uncertainty of the output in response to the uncertainties of the input variables. The parameterized independent variables include atmospheric longwave emissivity, air density, specific heat of air, latent heat of ice, conductivity of ice, snow depth, and snow conductivity. Measured input parameters include air temperature, ice surface temperature, and wind speed. Among the independent variables, the results show that the highest deviation is caused by adjusting the parameterization of snow conductivity and depth, followed ice conductivity. The sensitivity of the output TIT to ice thickness is highest when using parameterization of ice conductivity, atmospheric emissivity, and snow conductivity and depth. The retrieved TIT obtained using each parameterization scheme is validated using in situ measurements and satellite-retrieved data. From in situ measurements, the uncertainties of the measured air temperature and surface temperature are found to be high. The resulting uncertainties of TIT are evaluated using perturbations of the input data selected based on the probability distribution of the measurement error. The results show that the overall uncertainty of TIT to air temperature, surface temperature, and wind speed uncertainty is around 0.09 m, 0.049 m, and −0.005 m, respectively.
, Available online , doi: 10.1007/s13131-023-2282-7
Abstract:
Under global climate change, water flow and related nutrient biogeochemistry in the Arctic are changing at an unprecedented rate, and potentially affect nutrient cycling in the Arctic Ocean. However, nutrient fluxes via submarine groundwater discharge (SGD) are potentially important yet poorly understood in the Arctic. Here we quantified that nutrient fluxes through radium-derived SGD were three orders of magnitude higher than those from the local river and constituted 25-96% of the total nutrient inputs into the Kongsfjorden. These large groundwater nutrient fluxes with high N/P ratio (average 99) may change the biomass and community structure of phytoplankton. Meanwhile, combining other SGD study cases around the Arctic region, SGD rates tend to increase over the past three decades, possibly on account of the effects of global warming. The SGD-derived nutrient may cause the increase of net primary productivity in the Arctic Ocean. The results will provide important basic data for land-ocean interactions in the typical fjord of the Arctic under the influence of global warming.
Under global climate change, water flow and related nutrient biogeochemistry in the Arctic are changing at an unprecedented rate, and potentially affect nutrient cycling in the Arctic Ocean. However, nutrient fluxes via submarine groundwater discharge (SGD) are potentially important yet poorly understood in the Arctic. Here we quantified that nutrient fluxes through radium-derived SGD were three orders of magnitude higher than those from the local river and constituted 25-96% of the total nutrient inputs into the Kongsfjorden. These large groundwater nutrient fluxes with high N/P ratio (average 99) may change the biomass and community structure of phytoplankton. Meanwhile, combining other SGD study cases around the Arctic region, SGD rates tend to increase over the past three decades, possibly on account of the effects of global warming. The SGD-derived nutrient may cause the increase of net primary productivity in the Arctic Ocean. The results will provide important basic data for land-ocean interactions in the typical fjord of the Arctic under the influence of global warming.
, Available online , doi: 10.1007/s13131-023-2248-9
Abstract:
Sea ice surface roughness (SIR) affects the energy transfer between the atmosphere and the ocean, and it is also an important indicator for sea ice characteristics. To obtain a small-scale SIR with high spatial resolution, a novel method is proposed to retrieve SIR from Sentinel-1 synthetic aperture radar (SAR) images, utilizing an ensemble learning method. Firstly, the two-dimensional continuous wavelet transform is applied to obtain the spatial information of sea ice, including the scale and direction of ice patterns. Secondly, a model is developed using the Adaboost Regression model to establish a relationship among SIR, radar backscatter and the spatial information of sea ice. The proposed method is validated by using the SIR retrieved from SAR images and comparing it to the measurements obtained by the Airborne Topographic Mapper (ATM) in the summer Beaufort Sea. The determination of coefficient, mean absolute error, root-mean-square error and mean absolute percentage error of the testing data are 0.91, 1.71 cm, 2.82 cm and 36.37%, respectively, which are reasonable. Moreover, K-fold cross-validation and learning curves are analyzed, which also demonstrate the method's applicability in retrieving SIR from SAR images.
Sea ice surface roughness (SIR) affects the energy transfer between the atmosphere and the ocean, and it is also an important indicator for sea ice characteristics. To obtain a small-scale SIR with high spatial resolution, a novel method is proposed to retrieve SIR from Sentinel-1 synthetic aperture radar (SAR) images, utilizing an ensemble learning method. Firstly, the two-dimensional continuous wavelet transform is applied to obtain the spatial information of sea ice, including the scale and direction of ice patterns. Secondly, a model is developed using the Adaboost Regression model to establish a relationship among SIR, radar backscatter and the spatial information of sea ice. The proposed method is validated by using the SIR retrieved from SAR images and comparing it to the measurements obtained by the Airborne Topographic Mapper (ATM) in the summer Beaufort Sea. The determination of coefficient, mean absolute error, root-mean-square error and mean absolute percentage error of the testing data are 0.91, 1.71 cm, 2.82 cm and 36.37%, respectively, which are reasonable. Moreover, K-fold cross-validation and learning curves are analyzed, which also demonstrate the method's applicability in retrieving SIR from SAR images.
, Available online
Abstract:
Based on the Ocean Reanalysis System version 5 (ORAS5) and the fifth-generation reanalysis datasets (ERA5) derived from Medium-Range Weather Forecasts (ECMWF), we investigate the different impacts of the Central Pacific (CP) El Niño and the Eastern Pacific (EP) El Niño on the Southern Ocean (SO) mixed layer depth (MLD) during austral winter. The MLD response to the EP El Niño shows a dipole pattern in the South Pacific, namely the MLD dipole, which is the leading El Niño-induced MLD variability in the SO. The tropical Pacific warm sea surface temperature anomaly (SSTA) signal associated with the EP El Niño excites a Rossby wave train propagating southeastward and then enhances the Amundsen Sea Low (ASL). This results in an anomalous cyclone over the Amundsen Sea. As a result, the anomalous southerly wind to the west of this anomalous cyclone advects colder and drier air into the southeast of New Zealand, leading to surface cooling through less total surface heat flux, especially surface sensible heat (SH) flux and latent heat (LH) flux, and thus contributing to the ML deepening. The east of the anomalous cyclone brings warmer and wetter air to the southwest of Chile, but the total heat flux anomaly shows no significant change. The warm air promotes the sea ice melting and maintains fresh water, which strengthens stratification. This results in a shallower MLD. During the CP El Niño, the response of MLD shows a separate negative MLD anomaly center in the central South Pacific. The Rossby wave train triggered by the warm SSTA in the central Pacific Ocean spreads to the Amundsen Sea, which weakens the ASL. Therefore, the anomalous anticyclone dominates the Amundsen Sea. Consequently, the anomalous northerly wind to the west of anomalous anticyclone advects warmer and wetter air into the central and southern Pacific, causing surface warming through increased SH, LH and longwave (LW) radiation flux, and thus contributing to the ML shoaling. However, to the east of the anomalous anticyclone, there is no statistically significant impact on the MLD.
Based on the Ocean Reanalysis System version 5 (ORAS5) and the fifth-generation reanalysis datasets (ERA5) derived from Medium-Range Weather Forecasts (ECMWF), we investigate the different impacts of the Central Pacific (CP) El Niño and the Eastern Pacific (EP) El Niño on the Southern Ocean (SO) mixed layer depth (MLD) during austral winter. The MLD response to the EP El Niño shows a dipole pattern in the South Pacific, namely the MLD dipole, which is the leading El Niño-induced MLD variability in the SO. The tropical Pacific warm sea surface temperature anomaly (SSTA) signal associated with the EP El Niño excites a Rossby wave train propagating southeastward and then enhances the Amundsen Sea Low (ASL). This results in an anomalous cyclone over the Amundsen Sea. As a result, the anomalous southerly wind to the west of this anomalous cyclone advects colder and drier air into the southeast of New Zealand, leading to surface cooling through less total surface heat flux, especially surface sensible heat (SH) flux and latent heat (LH) flux, and thus contributing to the ML deepening. The east of the anomalous cyclone brings warmer and wetter air to the southwest of Chile, but the total heat flux anomaly shows no significant change. The warm air promotes the sea ice melting and maintains fresh water, which strengthens stratification. This results in a shallower MLD. During the CP El Niño, the response of MLD shows a separate negative MLD anomaly center in the central South Pacific. The Rossby wave train triggered by the warm SSTA in the central Pacific Ocean spreads to the Amundsen Sea, which weakens the ASL. Therefore, the anomalous anticyclone dominates the Amundsen Sea. Consequently, the anomalous northerly wind to the west of anomalous anticyclone advects warmer and wetter air into the central and southern Pacific, causing surface warming through increased SH, LH and longwave (LW) radiation flux, and thus contributing to the ML shoaling. However, to the east of the anomalous anticyclone, there is no statistically significant impact on the MLD.
, Available online , doi: 10.1007/s13131-023-2283-6
Abstract:
Highly productive estuaries facilitate intense decomposition of dissolved organic matter (DOM) as a carbon source. However, the specific impacts of typhoons on DOM decomposition in eutrophic bays remain unclear. To address this issue, we investigated the spectral characteristics of DOM before and after Typhoon “Ewiniar” in Zhanjiang Bay, a eutrophic semi-enclosed bay in the northwestern South China Sea. The results revealed that intense microbial decomposition of DOM occurred during the pre-typhoon period because high nutrient inputs facilitated the mobilization of DOM in the bay. However, the intrusion of external seawater induced by the typhoon diluted the nutrient levels in Zhanjiang Bay, reducing the impact of microbial decomposition on DOM during the post-typhoon period. Nevertheless, the net addition of DOM occurred in Zhanjiang Bay during the post-typhoon period, possibly because of the decomposition of particulate organic matter (POM) and desorption of particulate matter. In addition, an increase in apparent oxygen utilization, a decrease in DO saturation and the reduced level of Chl a indicated that organic matter (OM) decomposition was enhanced and OM decomposition shifted to POM decomposition in Zhanjiang Bay after the typhoon. Overall, our study highlighted the shift in the intense OM decomposition from DOM to POM decomposition before and after typhoons in eutrophic bays, providing new insights into the response of typhoons to biogeochemistry.
Highly productive estuaries facilitate intense decomposition of dissolved organic matter (DOM) as a carbon source. However, the specific impacts of typhoons on DOM decomposition in eutrophic bays remain unclear. To address this issue, we investigated the spectral characteristics of DOM before and after Typhoon “Ewiniar” in Zhanjiang Bay, a eutrophic semi-enclosed bay in the northwestern South China Sea. The results revealed that intense microbial decomposition of DOM occurred during the pre-typhoon period because high nutrient inputs facilitated the mobilization of DOM in the bay. However, the intrusion of external seawater induced by the typhoon diluted the nutrient levels in Zhanjiang Bay, reducing the impact of microbial decomposition on DOM during the post-typhoon period. Nevertheless, the net addition of DOM occurred in Zhanjiang Bay during the post-typhoon period, possibly because of the decomposition of particulate organic matter (POM) and desorption of particulate matter. In addition, an increase in apparent oxygen utilization, a decrease in DO saturation and the reduced level of Chl a indicated that organic matter (OM) decomposition was enhanced and OM decomposition shifted to POM decomposition in Zhanjiang Bay after the typhoon. Overall, our study highlighted the shift in the intense OM decomposition from DOM to POM decomposition before and after typhoons in eutrophic bays, providing new insights into the response of typhoons to biogeochemistry.
, Available online
Abstract:
Global carbon cycle has received extensive attention, among which the river-estuary system is one of the important links connecting the carbon cycle between land and ocean. In this paper, the distribution and control factors of particulate organic carbon (POC) were studied by using the data of organic carbon contents and its carbon isotopic composition (δ13C) in the mainstream and estuary of Passur River in the Sundarban area, combined with the hydrological and biological data measured by CTD. The results show that POC content ranged from 0.263 to 9.292 mg/L, and the POC content in the river section (averaged 4.129 mg/L) was significantly higher than that in the estuary area (averaged 0.858 mg/L). Two distinct stages of POC transport from land to sea in the Sundarban area were identified. The first stage occurred in the river section, where POC distribution was mainly controlled by the dynamic process of runoff and the organic carbon was mainly terrestrial source. The second stage occurred during estuarine mixing, where the POC distribution was mainly controlled by the mixing process of seawater and freshwater. The source of POC was predominantly marine and exhibiting vertical differences. The surface and middle layers were primarily influenced by marine sources, while the bottom layer was jointly controlled by terrestrial and marine sources of organic carbon. These findings are of great significance for understanding the carbon cycle in such a large mangrove ecosystem like the Sundarban Mangrove.
Global carbon cycle has received extensive attention, among which the river-estuary system is one of the important links connecting the carbon cycle between land and ocean. In this paper, the distribution and control factors of particulate organic carbon (POC) were studied by using the data of organic carbon contents and its carbon isotopic composition (δ13C) in the mainstream and estuary of Passur River in the Sundarban area, combined with the hydrological and biological data measured by CTD. The results show that POC content ranged from 0.263 to 9.292 mg/L, and the POC content in the river section (averaged 4.129 mg/L) was significantly higher than that in the estuary area (averaged 0.858 mg/L). Two distinct stages of POC transport from land to sea in the Sundarban area were identified. The first stage occurred in the river section, where POC distribution was mainly controlled by the dynamic process of runoff and the organic carbon was mainly terrestrial source. The second stage occurred during estuarine mixing, where the POC distribution was mainly controlled by the mixing process of seawater and freshwater. The source of POC was predominantly marine and exhibiting vertical differences. The surface and middle layers were primarily influenced by marine sources, while the bottom layer was jointly controlled by terrestrial and marine sources of organic carbon. These findings are of great significance for understanding the carbon cycle in such a large mangrove ecosystem like the Sundarban Mangrove.
, Available online
Abstract:
Ocean temperature is an important physical variable in marine ecosystems, and ocean temperature prediction is an important research objective in ocean-related fields. Currently, one of the commonly used methods for ocean temperature prediction is based on data-driven, but research on this method is mostly limited to the sea surface, with few studies on the prediction of internal ocean temperature. Existing graph neural network-based methods usually use predefined graphs or learned static graphs, which cannot capture the dynamic associations among data. In this study, we propose a novel dynamic spatiotemporal graph neural network (DSTGN) to predict three-dimensional ocean temperature (3D-OT), which combines static graph learning and dynamic graph learning to automatically mine two unknown dependencies between sequences based on the original 3D-OT data without prior knowledge. Temporal and spatial dependencies in the time series were then captured using temporal and graph convolutions. We also integrated dynamic graph learning, static graph learning, graph convolution, and temporal convolution into an end-to-end framework for 3D-OT prediction using time-series grid data. In this study, we conducted prediction experiments using high-resolution 3D-OT from the Copernicus global ocean physical reanalysis, with data covering the vertical variation of temperature from the sea surface to 1,000 m below the sea surface. We compared five mainstream models that are commonly used for ocean temperature prediction, and the results showed that the method achieved the best prediction results at all prediction scales.
Ocean temperature is an important physical variable in marine ecosystems, and ocean temperature prediction is an important research objective in ocean-related fields. Currently, one of the commonly used methods for ocean temperature prediction is based on data-driven, but research on this method is mostly limited to the sea surface, with few studies on the prediction of internal ocean temperature. Existing graph neural network-based methods usually use predefined graphs or learned static graphs, which cannot capture the dynamic associations among data. In this study, we propose a novel dynamic spatiotemporal graph neural network (DSTGN) to predict three-dimensional ocean temperature (3D-OT), which combines static graph learning and dynamic graph learning to automatically mine two unknown dependencies between sequences based on the original 3D-OT data without prior knowledge. Temporal and spatial dependencies in the time series were then captured using temporal and graph convolutions. We also integrated dynamic graph learning, static graph learning, graph convolution, and temporal convolution into an end-to-end framework for 3D-OT prediction using time-series grid data. In this study, we conducted prediction experiments using high-resolution 3D-OT from the Copernicus global ocean physical reanalysis, with data covering the vertical variation of temperature from the sea surface to 1,000 m below the sea surface. We compared five mainstream models that are commonly used for ocean temperature prediction, and the results showed that the method achieved the best prediction results at all prediction scales.
, Available online
Abstract:
The biogeochemical processes of marine sediments are influenced by bioturbation and organic carbon decomposition, which is crucial for understanding global element cycles and climate change. Two sediment cores were acquired in 2017 from abyssal basins in the central-eastern tropical Pacific to determine the bioturbation and organic carbon degradation processes. The radioactivity concentrations of 210Pb and 226Ra in the sediment cores were measured, indicating the presence of significant excess 210Pb (210Pbex) signals in the sediment cores. Besides, a manganese nodule was discovered in one core, which had a substantial influence on the distribution of 210Pbex. With the exception of this anomalous finding, the bioturbation coefficients in the remaining core were estimated to be 10.6 cm2/a using a steady-state diffusion model, greater than most of the deep-sea sediments from the Equatorial Eastern Pacific. By using a bio-diffusion model, we further calculated the degradation rates of organic carbon (8.02 ka-1), which is also higher than other areas of the Pacific. Our findings displayed the presence of a biologically active benthic ecosystem in the central-eastern tropical Pacific.
The biogeochemical processes of marine sediments are influenced by bioturbation and organic carbon decomposition, which is crucial for understanding global element cycles and climate change. Two sediment cores were acquired in 2017 from abyssal basins in the central-eastern tropical Pacific to determine the bioturbation and organic carbon degradation processes. The radioactivity concentrations of 210Pb and 226Ra in the sediment cores were measured, indicating the presence of significant excess 210Pb (210Pbex) signals in the sediment cores. Besides, a manganese nodule was discovered in one core, which had a substantial influence on the distribution of 210Pbex. With the exception of this anomalous finding, the bioturbation coefficients in the remaining core were estimated to be 10.6 cm2/a using a steady-state diffusion model, greater than most of the deep-sea sediments from the Equatorial Eastern Pacific. By using a bio-diffusion model, we further calculated the degradation rates of organic carbon (8.02 ka-1), which is also higher than other areas of the Pacific. Our findings displayed the presence of a biologically active benthic ecosystem in the central-eastern tropical Pacific.
, Available online
Abstract:
This study evaluates the performance of 16 models sourced from the Coupled Model Intercomparison Project phase 6 (CMIP6) in simulating marine heatwaves (MHWs) in the South China Sea (SCS) during the historical period (1982−2014), and also investigates future changes in SCS MHWs based on simulations from three Shared Socioeconomic Pathway (SSP) scenarios (SSP126, SSP245, and SSP585) using CMIP6 models. Results demonstrate that the CMIP6 models perform well in simulating the spatial-temporal distribution and intensity of SCS MHWs, with their multi-model ensemble (MME) results showing the best performance. The reasonable agreement between the observations and CMIP6 MME reveals that the increasing trends of SCS MHWs are attributed to the warming sea surface temperature trend. Under various SSP scenarios, the year 2040 emerges as pivotal juncture for future shifts in SCS MHWs, marked by distinct variations in changing rate and amplitudes. This is characterized by an accelerated decrease in MHWs frequency and a notably heightened increase in mean intensity, duration, and total days after 2040. Furthermore, the projection results for SCS MHWs suggest that the spatial pattern of MHWs remains consistent across future periods. However, the intensity shows higher consistency only during the near-term period (2021−2050), while notable inconsistencies are observed during the medium-term (2041−2700) and long-term (2701−2100) periods under the three SSP scenarios. During the near-term period, the SCS MHWs are characterized by moderate and strong events with high frequencies and relatively shorter durations. In contrast, during the medium-term period, MHWs are also characterized by moderate and strong events, but with longer-lasting and more intense events under the SSP245 and SSP585 scenarios. However, in the long-term period, extreme MHWs become the dominant feature under the SSP585 scenario, indicating a substantial intensification of SCS MHWs, effectively establishing a near-permanent state.
This study evaluates the performance of 16 models sourced from the Coupled Model Intercomparison Project phase 6 (CMIP6) in simulating marine heatwaves (MHWs) in the South China Sea (SCS) during the historical period (1982−2014), and also investigates future changes in SCS MHWs based on simulations from three Shared Socioeconomic Pathway (SSP) scenarios (SSP126, SSP245, and SSP585) using CMIP6 models. Results demonstrate that the CMIP6 models perform well in simulating the spatial-temporal distribution and intensity of SCS MHWs, with their multi-model ensemble (MME) results showing the best performance. The reasonable agreement between the observations and CMIP6 MME reveals that the increasing trends of SCS MHWs are attributed to the warming sea surface temperature trend. Under various SSP scenarios, the year 2040 emerges as pivotal juncture for future shifts in SCS MHWs, marked by distinct variations in changing rate and amplitudes. This is characterized by an accelerated decrease in MHWs frequency and a notably heightened increase in mean intensity, duration, and total days after 2040. Furthermore, the projection results for SCS MHWs suggest that the spatial pattern of MHWs remains consistent across future periods. However, the intensity shows higher consistency only during the near-term period (2021−2050), while notable inconsistencies are observed during the medium-term (2041−2700) and long-term (2701−2100) periods under the three SSP scenarios. During the near-term period, the SCS MHWs are characterized by moderate and strong events with high frequencies and relatively shorter durations. In contrast, during the medium-term period, MHWs are also characterized by moderate and strong events, but with longer-lasting and more intense events under the SSP245 and SSP585 scenarios. However, in the long-term period, extreme MHWs become the dominant feature under the SSP585 scenario, indicating a substantial intensification of SCS MHWs, effectively establishing a near-permanent state.
, Available online , doi: 10.1007/s13131-023-2267-6
Abstract:
Marine sediments were collected from the Pearl River Estuary (PRE) and South China Sea (SCS) to study the occurrence and spatial distribution of tetrabromobisphenol A (TBBPA) and hexabromocyclododecane (HBCDD). The levels of TBBPA and HBCDD in sediments ranged from not detected (nd) to 6.14 ng/g dry weight (dw) and nd to 0.42 ng/g dw. TBBPA concentrations in marine sediments were substantially higher than HBCDD. The concentrations of TBBPA and HBCDD in the PRE sediments were significantly greater than those in the SCS. α-HBCDD (48.7%) and γ-HBCDD (46.2%) were the two main diastereoisomers of HBCDD in sediments from the PRE, with minor contribution of β-HBCDD (5.1%). HBCDD were only found in one sample from the northern SCS. The enantiomeric fraction of α-HBCDD in sediments from the PRE was obviously greater than 0.5, indicating an accumulation of (+)-α-HBCDD. The enantiomers of HBCDD were not measured in sediments from the SCS. This work highlighted the environmental behaviors of TBBPA and HBCDD in marine sediments.
Marine sediments were collected from the Pearl River Estuary (PRE) and South China Sea (SCS) to study the occurrence and spatial distribution of tetrabromobisphenol A (TBBPA) and hexabromocyclododecane (HBCDD). The levels of TBBPA and HBCDD in sediments ranged from not detected (nd) to 6.14 ng/g dry weight (dw) and nd to 0.42 ng/g dw. TBBPA concentrations in marine sediments were substantially higher than HBCDD. The concentrations of TBBPA and HBCDD in the PRE sediments were significantly greater than those in the SCS. α-HBCDD (48.7%) and γ-HBCDD (46.2%) were the two main diastereoisomers of HBCDD in sediments from the PRE, with minor contribution of β-HBCDD (5.1%). HBCDD were only found in one sample from the northern SCS. The enantiomeric fraction of α-HBCDD in sediments from the PRE was obviously greater than 0.5, indicating an accumulation of (+)-α-HBCDD. The enantiomers of HBCDD were not measured in sediments from the SCS. This work highlighted the environmental behaviors of TBBPA and HBCDD in marine sediments.
, Available online
Abstract:
Seasonal location and intensity changes in the western Pacific subtropical high (WPSH) are important factors dominating the synoptic weather and the distribution and magnitude of precipitation in the rain belt over East Asia. Therefore, this article delves into the forecast of the western Pacific subtropical high index during typhoon activity by adopting a hybrid deep learning model. Firstly, the predictors, which are the inputs of the model, are analysed based on three characteristics: the first is the statistical discipline of the WPSH index anomalies corresponding to the three types of typhoon paths; the second is the correspondence of distributions between sea surface temperature (SST), 850 hPa zonal wind (u), meridional wind (v), and 500 hPa potential height field; and the third is the numerical sensitivity experiment, which reflects the evident impact of variations in the physical field around the typhoon to the WPSH index. Secondly, the model is repeatedly trained through the backward propagation algorithm to predict the WPSH index using 2011-2018 atmospheric variables as the input of the training set. The model predicts the WPSH index after 6 h, 24 h, 48 h, and 72 h. The validation set using independent data in 2019 is utilized to illustrate the performance. Finally, the model is improved by changing the CNN2D module to the DeCNN module to enhance its ability to predict images. Taking the 2019 Typhoon Lekima as an example, it shows the promising performance of this model to predict the 500 hPa potential height field.
Seasonal location and intensity changes in the western Pacific subtropical high (WPSH) are important factors dominating the synoptic weather and the distribution and magnitude of precipitation in the rain belt over East Asia. Therefore, this article delves into the forecast of the western Pacific subtropical high index during typhoon activity by adopting a hybrid deep learning model. Firstly, the predictors, which are the inputs of the model, are analysed based on three characteristics: the first is the statistical discipline of the WPSH index anomalies corresponding to the three types of typhoon paths; the second is the correspondence of distributions between sea surface temperature (SST), 850 hPa zonal wind (u), meridional wind (v), and 500 hPa potential height field; and the third is the numerical sensitivity experiment, which reflects the evident impact of variations in the physical field around the typhoon to the WPSH index. Secondly, the model is repeatedly trained through the backward propagation algorithm to predict the WPSH index using 2011-2018 atmospheric variables as the input of the training set. The model predicts the WPSH index after 6 h, 24 h, 48 h, and 72 h. The validation set using independent data in 2019 is utilized to illustrate the performance. Finally, the model is improved by changing the CNN2D module to the DeCNN module to enhance its ability to predict images. Taking the 2019 Typhoon Lekima as an example, it shows the promising performance of this model to predict the 500 hPa potential height field.
, Available online , doi: 10.1007/s13131-020-1589-x
Abstract:
Protease-producing bacteria play key roles in the degradation of organic nitrogen materials in marine sediments. However, their diversity, production of proteases and other extracellular enzymes, even in situ ecological functions remain largely unknown. In this study, we investigated the diversity of cultivable extracellular protease-producing bacteria in the sediments of the Bohai Bay. A total of 109 bacterial isolates were obtained from the sediments of 7 stations. The abundance of cultivable protease-producing bacteria was about 104 CFU/g of sediment in all the samples. Phylogenetic analysis based on 16S rRNA gene sequences classified all the isolates into 14 genera from phyla Proteobacteria, Firmicutes, Bacteroidetes and Actinobacteria, with Pseudoalteromonas (63/109, 57.8%), Bacillus (9/109, 8.2%), Sulfitobacter (8/109, 7.3%) and Salegentibacter (6/109, 5.5%) as the dominant taxa. Enzymatic inhibition tests indicated that all the tested isolates produced serine and/or metalloprotease, with only a small proportion producing cysteine and/or aspartic proteases. Several extracellular enzyme activities, including alginase, lipase, amylase and cellulose, and nitrate reduction were also detected for strains with higher protease activities. According the results, the protease-producing bacteria could also be participate in many biogeochemical processes in marine sediments. Our study broadened understanding and knowledge on the potential ecological functions of protease-producing bacteria in marine sediments.
Protease-producing bacteria play key roles in the degradation of organic nitrogen materials in marine sediments. However, their diversity, production of proteases and other extracellular enzymes, even in situ ecological functions remain largely unknown. In this study, we investigated the diversity of cultivable extracellular protease-producing bacteria in the sediments of the Bohai Bay. A total of 109 bacterial isolates were obtained from the sediments of 7 stations. The abundance of cultivable protease-producing bacteria was about 104 CFU/g of sediment in all the samples. Phylogenetic analysis based on 16S rRNA gene sequences classified all the isolates into 14 genera from phyla Proteobacteria, Firmicutes, Bacteroidetes and Actinobacteria, with Pseudoalteromonas (63/109, 57.8%), Bacillus (9/109, 8.2%), Sulfitobacter (8/109, 7.3%) and Salegentibacter (6/109, 5.5%) as the dominant taxa. Enzymatic inhibition tests indicated that all the tested isolates produced serine and/or metalloprotease, with only a small proportion producing cysteine and/or aspartic proteases. Several extracellular enzyme activities, including alginase, lipase, amylase and cellulose, and nitrate reduction were also detected for strains with higher protease activities. According the results, the protease-producing bacteria could also be participate in many biogeochemical processes in marine sediments. Our study broadened understanding and knowledge on the potential ecological functions of protease-producing bacteria in marine sediments.
