[1] Andreae M O. 1990. Ocean-atmosphere interactions in the global biogeochemical sulfur cycle. Marine Chemistry, 30: 1-29, doi: 10.1016/0304-4203(90)90059-L
[2] Bürgermeister S, Georgii H W, Zimmermann R L, et al. 1990. On the biogenic origin of dimethylsulfide: relation between chlorophyll, ATP, organismic DMSP, phytoplankton species, and DMS distribution in Atlantic surface water and atmosphere. Journal of Geophysical Research: Atmosphere, 95(D12): 20607-20615, doi: 10.1029/JD095iD12p20607
[3] Biers E J, Wang Kui, Pennington C, et al. 2008. Occurrence and expression of gene transfer agent genes in marine bacterioplankton. Applied and Environmental Microbiology, 74(10): 2933-2939, doi: 10.1128/AEM.02129-07
[4] Bullock H A, Luo Haiwei, Whitman W B. 2017. Evolution of dimethylsulfoniopropionate metabolism in marine phytoplankton and bacteria. Frontiers in Microbiology, 8: 637, doi: 10.3389/fmicb.2017.00637
[5] Charlson R J, Lovelock J E, Andreae M O, et al. 1987. Oceanic phytoplankton, atmospheric sulphur, cloud albedo and climate. Nature, 326(6114): 655-661, doi: 10.1038/326655a0
[6] Cui Yingshun, Suzuki S, Omori Y, et al. 2015. Abundance and distribution of dimethylsulfoniopropionate degradation genes and the corresponding bacterial community structure at dimethyl sulfide hot spots in the tropical and subtropical Pacific Ocean. Applied and Environmental Microbiology, 81(12): 4184-4194, doi: 10.1128/AEM.03873-14
[7] Curson A R J, Todd J D, Sullivan M J, et al. 2011. Catabolism of dimethylsulphoniopropionate: microorganisms, enzymes and genes. Nature Reviews Microbiology, 9(12): 849-859, doi: 10.1038/nrmicro2653
[8] Fu Yunyun, MacLeod D M, Rivkin R B, et al. 2010. High diversity of Rhodobacterales in the subarctic North Atlantic Ocean and gene transfer agent protein expression in isolated strains. Aquatic Microbial Ecology, 59(3): 283-293, doi: 10.3354/ame01398
[9] Fuhrman J A, Lee S H, Masuchi Y, et al. 1994. Characterization of marine prokaryotic communities via DNA and RNA. Microbial Ecology, 28(2): 133-145, doi: 10.1007/BF00166801
[10] González J M, Covert J S, Whitman W B, et al. 2003. Silicibacter pomeroyi sp. nov. and Roseovarius nubinhibens sp. nov., dimethylsulfoniopropionate-demethylating bacteria from marine environments. International Journal of Systematic and Evolutionary Microbiology, 53(5): 1261-1269, doi: 10.1099/ijs.0.02491-0
[11] González J M, Kiene R P, Moran M A. 1999. Transformation of sulfur compounds by an abundant lineage of marine bacteria in the α-subclass of the class Proteobacteria. Applied and Environmental Microbiology, 65(9): 3810-3819
[12] Guillard R R L, Ryther J H. 1962. Studies of marine planktonic diatoms: I. Cyclotella nana Hustedt, and Detonula confervacea (Cleve) Gran. Canadian Journal of Microbiology, 8(2): 229-239, doi: 10.1139/m62-029
[13] Herlemann D P R, Woelk J, Labrenz M, et al. 2014. Diversity and abundance of “Pelagibacterales” (SAR11) in the Baltic Sea salinity gradient. Systematic and Applied Microbiology, 37(8): 601-604, doi: 10.1016/j.syapm.2014.09.002
[14] Hollibaugh J T, Bano N, Ducklow H W. 2002. Widespread distribution in polar oceans of a 16S rRNA gene sequence with affinity to Nitrosospira-like ammonia-oxidizing bacteria. Applied and Environmental Microbiology, 68(3): 1478-1484, doi: 10.1128/AEM.68.3.1478-1484.2002
[15] Howard E C, Henriksen J R, Buchan A, et al. 2006. Bacterial taxa that limit sulfur flux from the ocean. Science, 314(5799): 649-652, doi: 10.1126/science.1130657
[16] Howard E C, Sun Shulei, Biers E J, et al. 2008. Abundant and diverse bacteria involved in DMSP degradation in marine surface waters. Environmental Microbiology, 10(9): 2397-2410, doi: 10.1111/j.1462-2920.2008.01665.x
[17] Howard E C, Sun Shulei, Reisch C R, et al. 2011. Changes in dimethylsulfoniopropionate demethylase gene assemblages in response to an induced phytoplankton bloom. Applied and Environmental Microbiology, 77(2): 524-531, doi: 10.1128/AEM.01457-10
[18] Huber T, Faulkner G, Hugenholtz P. 2004. Bellerophon: a program to detect chimeric sequences in multiple sequence alignments. Bioinformatics, 20(14): 2317-2319, doi: 10.1093/bioinformatics/bth226
[19] Johnston A W B, Green R T, Todd J D. 2016. Enzymatic breakage of dimethylsulfoniopropionate—a signature molecule for life at sea. Current Opinion in Chemical Biology, 31: 58-65, doi: 10.1016/j.cbpa.2016.01.011
[20] Johnston A W B, Todd J D, Sun Lei, et al. 2008. Molecular diversity of bacterial production of the climate-changing gas, dimethyl sulphide, a molecule that impinges on local and global symbioses. Journal of Experimental Botany, 59(5): 1059-1067, doi: 10.1093/jxb/erm264
[21] Karsten U, Kück K, Vogt C, et al. 1996. Dimethylsulfoniopropionate production in phototrophic organisms and its physiological functions as a cryoprotectant. In: Kiene R P, Visscher P T, Keller M D, et al., eds. Biological and Environmental Chemistry of DMSP and Related Sulfonium Compounds. New York: Plenum Press, 143-153
[22] Keller M D. 1989. Dimethyl sulfide production and marine phytoplankton: the importance of species composition and cell size. Biological Oceanography, 6(5-6): 375-382, doi: 10.1080/01965581.1988.10749540
[23] Kiene R P. 1990. Dimethyl sulfide production from dimethylsulfoniopropionate in coastal seawater samples and bacterial cultures. Applied and Environmental Microbiology, 56(11): 3292-3297
[24] Kiene R P, Linn L J. 2000. Distribution and turnover of dissolved DMSP and its relationship with bacterial production and dimethylsulfide in the Gulf of Mexico. Limnology and Oceanography, 45(4): 849-861, doi: 10.4319/lo.2000.45.4.0849
[25] Kiene R P, Linn L J, Bruton J A. 2000. New and important roles for DMSP in marine microbial communities. Journal of Sea Research, 43(3-4): 209-224, doi: 10.1016/S1385-1101(00)00023-X
[26] Kiene R P, Linn L J, González J, et al. 1999. Dimethylsulfoniopropionate and methanethiol are important precursors of methionine and protein-sulfur in marine bacterioplankton. Applied and Environmental Microbiology, 65(10): 4549-4558
[27] Kirst G O, Thiel C, Wolff H, et al. 1990. Dimethylsulfoniopropionate (DMSP) in icealgae and its possible biological role. Marine Chemistry, 35(1-4): 381-388, doi: 10.1016/S0304-4203(09)90030-5
[28] Lang A S, Beatty J T. 2007. Importance of widespread gene transfer agent genes in α-proteobacteria. Trends in Microbiology, 15(2): 54-62, doi: 10.1016/j.tim.2006.12.001
[29] Lang A S, Zhaxybayeva O, Beatty J T. 2012. Gene transfer agents: phage-like elements of genetic exchange. Nature Reviews Microbiology, 10(7): 472-482, doi: 10.1038/nrmicro2802
[30] Marrs B. 1974. Genetic recombination in Rhodopseudomonas capsulata. Proceedings of the National Academy of Sciences of the United States of America, 71(3): 971-973, doi: 10.1073/pnas.71.3.971
[31] McDaniel L D, Young E, Delaney J, et al. 2010. High frequency of horizontal gene transfer in the oceans. Science, 330(6000): 50, doi: 10.1126/science.1192243
[32] Moran M A, Reisch C R, Kiene R P, et al. 2012. Genomic insights into bacterial DMSP transformations. Annual Review of Marine Science, 4: 523-542, doi: 10.1146/annurev-marine-120710-100827
[33] Pawlowski J, Fahrni J, Lecroq B, et al. 2007. Bipolar gene flow in deep-sea benthic foraminifera. Molecular Ecology, 16(19): 4089-4096, doi: 10.1111/j.1365-294X.2007.03465.x
[34] Pommier T, Pinhassi J, Hagström A. 2005. Biogeographic analysis of ribosomal RNA clusters from marine bacterioplankton. Aquatic Microbial Ecology, 41(1): 79-89, doi: 10.3354/ame041079
[35] Reisch C R, Moran M A, Whitman W B. 2008. Dimethylsulfoniopropionate-dependent demethylase (DmdA) from Pelagibacter ubique and Silicibacter pomeroyi. Journal of Bacteriology, 190(24): 8018-8024, doi: 10.1128/JB.00770-08
[36] Reisch C R, Stoudemayer M J, Varaljay V A, et al. 2011. Novel pathway for assimilation of dimethylsulphoniopropionate widespread in marine bacteria. Nature, 473(7346): 208-211, doi: 10.1038/nature10078
[37] Ripp S, Miller R V. 1995. Effects of suspended particulates on the frequency of trans diverse and dynamic Roseobacter and Rhodobacter populations in the Chesapeake bay. The ISME Journal, 3(3): 364-373, doi: 10.1038/ismej.2008.115
[38] et al. 2014. Salinity as a regulator of DMSP degradation in Ruegeria pomeroyi DSS-3. Journal of Microbiology, 52(11): 948-954, doi: 10.1007/s12275-014-4409-1
[39] Sambrook J, Russell D W. 2001. Molecular Cloning: A Laboratory Manual. New York: Cold Spring Harbor Laboratory Press
[40] Schwartz S E, Andreae M O. 1996. Uncertainty in climate change caused by aerosols. Science, 272(5265): 1121, doi: 10.1126/science.272.5265.1121
[41] Shaw G E. 1983. Bio-controlled thermostasis involving the sulfur cycle. Climatic Change, 5(3): 297-303, doi: 10.1007/BF02423524
[42] Solioz M, Marrs B. 1977. The gene transfer agent of Rhodopseudomonas capsulata: purification and characterization of its nucleic acid. Archives of Biochemistry and Biophysics, 181(1): 300-307, doi: 10.1016/0003-9861(77)90508-2
[43] Sun Jing, Todd J D, Thrash J C, et al. 2016. The abundant marine bacterium Pelagibacter simultaneously catabolizes dimethylsulfoniopropionate to the gases dimethyl sulfide and methanethiol. Nature Microbiology, 1(8): 16065, doi: 10.1038/nmicrobiol.2016.65
[44] Sunda W, Kieber D J, Kiene R P, et al. 2002. An antioxidant function for DMSP and DMS in marine algae. Nature, 418(6895): 317-320, doi: 10.1038/nature00851
[45] Tamura K, Peterson D, Peterson N, et al. 2011. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution, 28(10): 2731-2739, doi: 10.1093/molbev/msr121
[46] Thompson J D, Higgins D G, Gibson T J. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research, 22(22): 4673-4680, doi: 10.1093/nar/22.22.4673
[47] Turner S M, Nightingale P D, Broadgate W, et al. 1995. The distribution of dimethyl sulphide and dimethylsulphoniopropionate in Antarctic waters and sea ice. Deep Sea Research Part Ⅱ: Topical Studies in Oceanography, 42(4-5): 1059-1080, doi: 10.1016/0967-0645(95)00066-y
[48] Vettori C, Stotzky G, Yoder M, et al. 1999. Interaction between bacteriophage PBS1 and clay minerals and transduction of Bacillus subtilis by clay-phage complexes. Environmental Microbiology, 1(4): 347-355, doi: 10.1046/j.1462-2920.1999.00044.x
[49] Visscher P T, Diaz M R, Taylor B F. 1992. Enumeration of bacteria which cleave or demethylate dimethylsulfoniopropionate in the Caribbean Sea. Marine Ecology Progress Series, 89: 293-296, doi: 10.3354/meps089293
[50] Weinbauer M G. 2004. Ecology of prokaryotic viruses. FEMS Microbiology Reviews, 28(2): 127-181, doi: 10.1016/j.femsre.2003.08.001
[51] Wolfe G V, Steinke M, Kirst G O. 1997. Grazing-activated chemical defence in a unicellular marine alga. Nature, 387(6636): 894-897, doi: 10.1038/43168
[52] Yen H C, Hu N T, Marrs B L. 1979. Characterization of the gene transfer agent made by an overproducer mutant of Rhodopseudomonas capsulata. Journal of Molecular Biology, 131(2): 157-168, doi: 10.1016/0022-2836(79)90071-8
[53] Yu Yong, Yan Shulin, Li Huirong, et al. 2011. Roseicitreum antarcticum gen. nov., sp. nov., an aerobic bacteriochlorophyll a-containing alphaproteobacterium isolated from Antarctic sandy intertidal sediment. International Journal of Systematic and Evolutionary Microbiology, 61(9): 2173-2179, doi: 10.1099/ijs.0.024885-0
[54] Zeng Yinxin, Liu Wenqi, Li Huirong, et al. 2007. Effect of restriction endonucleases on assessment of biodiversity of cultivable polar marine planktonic bacteria by amplified ribosomal DNA restriction analysis. Extremophiles, 11(5): 685-692, doi: 10.1007/s00792-007-0086-x
[55] Zeng Yinxin, Qiao Zongyun, Yu Yong, et al. 2016. Diversity of bacterial dimethylsulfoniopropionate degradation genes in surface seawater of Arctic Kongsfjorden. Scientific Reports, 6: 33031, doi: 10.1038/srep33031
[56] Zhao Yanlin, Wang Kui, Budinoff C, et al. 2008. Gene transfer agent (GTA) genes reveal