Volume 39 Issue 10
Oct.  2020
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Bingxin Huang, Linhong Teng, Jingjing Jiang, Lanping Ding. Phenotypic plasticity and taxonomy of Cladophora gracilis (Griffiths) Kützing (Cladophorales, Chlorophyta) in the western Yellow Sea with the implication of its DNA barcode[J]. Acta Oceanologica Sinica, 2020, 39(10): 162-170. doi: 10.1007/s13131-020-1586-0
Citation: Bingxin Huang, Linhong Teng, Jingjing Jiang, Lanping Ding. Phenotypic plasticity and taxonomy of Cladophora gracilis (Griffiths) Kützing (Cladophorales, Chlorophyta) in the western Yellow Sea with the implication of its DNA barcode[J]. Acta Oceanologica Sinica, 2020, 39(10): 162-170. doi: 10.1007/s13131-020-1586-0

Phenotypic plasticity and taxonomy of Cladophora gracilis (Griffiths) Kützing (Cladophorales, Chlorophyta) in the western Yellow Sea with the implication of its DNA barcode

doi: 10.1007/s13131-020-1586-0
Funds:  The National Natural Science Foundation of China under contract Nos 31670199, 31400186 and 30499340; the Knowledge Innovation Project of Chinese Academy of Sciences under contract No. KSCX2-YW -Z-018; the Scientific Research Plan of Tianjin Municipal Education Committee under contract No. JW1705; the Research Fund for Talented Scholars of Tianjin Normal University (2016).
More Information
  • Corresponding author: E-mail: skydlp@tjnu.edu.cn
  • Received Date: 2019-04-18
  • Accepted Date: 2019-09-20
  • Available Online: 2020-12-28
  • Publish Date: 2020-10-25
  • Due to extensive morphological plasticity, the taxonomy of Cladophora species remains unclear. As one of the widely distributed species, C. gracilis was reported to hold many varieties, which make it difficult to identify the species. This study explored the morphology diversity of nine C. gracilis samples collected along the coast of western Yellow Sea. Some samples showed extremely varied characteristics, by which one cannot classify them correctly. Hence, 18S rDNA and nuclear ribosomal DNA internal transcribed spacer regions (ITS) sequences were employed to delimit species. For 18S rDNA, sequence similarity ranged from 99.6% to 100%. For ITS region, the similarity ranged from 98.7% to 100%. Molecular data strongly suggested that the morphologically heterogeneous samples were actually the same species. Characteristics comparison of the samples revealed that the taxonomy criteria including branching pattern and density, thallus color, height and texture varied widely, influenced by environmental conditions and age of alga. Besides, cell dimensions, as the relatively stable criterion, also exhibited intraspecific variance. Successful application of 18S rDNA and ITS sequences indicated that molecular method can be a powerful assistant as DNA barcodes to traditional morphology taxonomy.
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  • [1]
    Adams J. 1907. The seaweeds of the Antrim coast [dissertation]. Ulster: Ulster Fisheries and Biological Association, 29–37
    [2]
    Bakker F T, Olsen J L, Stam W T, et al. 1992. Nuclear ribosomal DNA internal transcribed spacer regions (ITS1 and ITS2) define discrete biogeographic groups in Cladophora albida (Chlorophyta). Journal of Phycology, 28(6): 839–845. doi: 10.1111/j.0022-3646.1992.00839.x
    [3]
    Bakker F T, Olsen J L, Stam W T, et al. 1994. The Cladophora complex (Chlorophyta): new views based on 18S rRNA gene sequences. Molecular Phylogenetics and Evolution, 3(4): 365–382. doi: 10.1006/mpev.1994.1043
    [4]
    Ding Lanping, Luan Rixiao. 2013. Flora Algarum Marinarum (in Chinese). Beijing: Science Press
    [5]
    Dodds W K, Gudder D A. 1992. The ecology of Cladophora. Journal of Phycology, 28(4): 415–427. doi: 10.1111/j.0022-3646.1992.00415.x
    [6]
    Foslie M H. 1890. Contribution to knowledge of the marine algae of Norway: I. East-Finmarken. Tromsø Museums Aarshefter B, 13: 1–186
    [7]
    Goff L J, Moon D A, Coleman A W. 1994. Molecular delineation of species and species relationships in the red algal agarophytes Gracilariopsis and Gracilaria (Gracilariales). Journal of Phycology, 30(3): 521–537. doi: 10.1111/j.0022-3646.1994.00521.x
    [8]
    Guiry M D. 2018. AlgaeBase. World-wide electronic publication, National University of Ireland, Galway. http://www.algaebase.org [2018–11–08]
    [9]
    Hall T A. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series, 41: 95–98
    [10]
    Hamel G. 1928. La répartition des algues à Saint-Malo et dans la Rance. Travaux du Laboratoire maritime du Muséum national d’Histoire naturelle à l’Arsenal de Saint-Servan, 3: 1–27
    [11]
    Harvey W H. 1834. Algological illustrations. No. I. Remarks on some British algae, and descriptions of new species recently added to our flora. Journal of Botany [Hooker], 1: 296–305
    [12]
    Harvey W H. 1849. A Manual of the British Marine Algae: Containing Generic and Specific Descriptions of All the Known British Species of Sea-Weeds. London: John Van Voorst, 1–252
    [13]
    Kimura M. 1980. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution, 16(2): 111–120. doi: 10.1007/BF01731581
    [14]
    Kjellman F R. 1883. Norra Ishafvets algflora. Vega-expeditionens Vetenskapliga Arbeten, 3: 1–431
    [15]
    Kützing F T. 1843. Phycologia generalis oder Anatomie, Physiologie und Systemkunde der Tange. Mit 80 farbig gedruckten Tafeln, gezeichnet und gravirt vom Verfasser. Leipzig: F A Brockhaus, 143–458
    [16]
    Kützing F T. 1845. Phycologia germanica, d.i. Deutschlands Algen in bündigen Beschreibungen. Nebst einer Anleitung zum Untersuchen und Bestimmen dieser Gewächse für Anfänger. Nordhausen: W. Köhne, 1–340
    [17]
    Kützing F T. 1849. Species Algarum. Lipsiae: F A Brockhaus
    [18]
    Lee Y, Kang S. 2001. A Catalogue of the Seaweeds in Korea. Jeju: Cheju National University Press, 8, 1–662
    [19]
    Luan Rixiao. 1989. Field Guide of Marine Algae Along Dalian Coast (in Chinese). Dalian: Dalian Maritime University Press, 1–129
    [20]
    Mathieson A C, Norton T A, Neushul M. 1981. The taxonomic implications of genetic and environmentally induced variations in seaweed morphology. The Botanical Review, 47(3): 313–347. doi: 10.1007/BF02860577
    [21]
    Okamura K. 1936. Nippon Kaisô Shi [Descriptions of Japanese algae]. Tokyo: Uchidarokakuho, 1–964
    [22]
    Sakai Y. 1964. The species of Cladophora from Japan and its vicinity. Scientific Papers of the Institute of Algological Research, Faculty of Science, Hokkaido University, 5(1): 1–104
    [23]
    Setchell W A, Gardner N L. 1920. The Marine Algae of the Pacific Coast of North America. Part Ⅱ. Chlorophyceae. California: University of California Publications in Botany, 8: 139–374
    [24]
    Söderström J. 1963. Studies in Cladophora. Botanica Gothoburgensia, 1: 1–147
    [25]
    Söderström J. 1965. Remarks on some species of Cladophora in the sense of van den Hoek and of Söderström. Botanica Marina, 8(1–2): 169–182
    [26]
    Swofford D L. 2002. PAUP: Phylogenetic Analysis Using Parsimony (and Other Methods). Sunderland, Massachusetts: Sinauer Associates
    [27]
    Tamura K, Dudley J, Nei M, et al. 2007. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Molecular Biology and Evolution, 24(8): 1596–1599. doi: 10.1093/molbev/msm092
    [28]
    Taylor W R. 1957. Marine Algae of the Northeastern Coast of North America. Ann Arbor: The University of Michigan Press
    [29]
    Taylor W R. 1960. Marine Algae of the Eastern Tropical and Subtropical Coasts of the Americas. Ann Arbor: Ann Arbor the University of Michigan Press, 1–870
    [30]
    Thompson J D, Gibson T J, Plewniak F, et al. 1997. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research, 25(24): 4876–4882. doi: 10.1093/nar/25.24.4876
    [31]
    van den Hoek C. 1963. Revision of the European species of Cladophora. Leiden: Brill E J, 1–248
    [32]
    van den Hoek C. 1982. A Taxonomic Revision of the American Species of Cladophora (Chlorophyceae) in the North Atlantic Ocean and Their Geographic Distribution. Amsterdam: North Holland Publishing
    [33]
    van den Hoek C, Chihara M. 2000. A Taxonomic Revision of the Marine Species of Cladophora (Chlorophyta) Along the Coasts of Japan and the Russion Far-East. Tokyo: Natural Science Museum
    [34]
    Yoshida T. 1998. Marine Algae of Japan. Tokyo: Uchida Rokakuho Publishing Co, Ltd, 1–2, 1–25, 1–1222
    [35]
    Zechman F W, Zimmer E A, Theriot E C. 1994. Use of ribosomal DNA internal transcribed spacers for phylogenetic studies in diatoms. Journal of Phycology, 30(3): 507–512. doi: 10.1111/j.0022-3646.1994.00507.x
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